Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGAGAATGGAGTCAGTT
.(((((((((.((((.(((...&)))..)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052936
GeneSymbolATG4A
Binding site41,61
Score0.923
Seed1
Au0.588
Energy-21.0
Binding len20
Me-6.851
Phylopstem3.5175972222222227
Phylopflank2.7005450029999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure