Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTGTATGCAAGGTT
((((.(((((((((.(......&).))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_052945
GeneSymbolTNFRSF13C
Binding site3489,3506
Score0.846
Seed0
Au0.515
Energy-17.3
Binding len17
Me-8.792
Phylopstem-0.28929767888888885
Phylopflank-0.005712504125000012
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end1
Position3UTR
2D Structure