Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAAAAAGGGGTCAA
...((((((((((.(((((((.&))))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052961
GeneSymbolSLC26A8
Binding site3098,3117
Score1.0
Seed0
Au0.529
Energy-26.8
Binding len19
Me-7.371
Phylopstem2.237702
Phylopflank1.2660154441250002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure