Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCCCGCCAAGGAGCCAGG
..((((((((((..((((....&.))))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052961
GeneSymbolSLC26A8
Binding site119,139
Score0.846
Seed1
Au0.324
Energy-25.1
Binding len18
Me-7.103
Phylopstem0.05343932
Phylopflank0.20986064550000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure