Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGCCCATTCCCAGCTCCTTGTCTGGGGAGCCTTGG
((..(((((((((((((((((.&))))))))).....................)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052968
GeneSymbolAPOA5
Binding site1182,1224
Score0.846
Seed0
Au0.397
Energy-26.5
Binding len42
Me-8.527
Phylopstem1.207938847368421
Phylopflank1.3400467100000002
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
Position3UTR
2D Structure