Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGATTCTGCGGCTAGTGG
((((((((.(..((((((.((.&))))))))....).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052985
GeneSymbolIFT122
Binding site3652,3675
Score0.885
Seed1
Au0.471
Energy-23.3
Binding len23
Me-11.166
Phylopstem2.335281625
Phylopflank2.4616562535
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure