Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGTATCGGGC
.(((((.(((((((((......&))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_052987
GeneSymbolCDK10
Binding site135,151
Score0.821
Seed0
Au0.412
Energy-16.9
Binding len16
Me-5.337
Phylopstem5.442166666666668
Phylopflank4.90250692625
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end2
Position5UTR
2D Structure