Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTACAGCCGGCTCACTGCAAA
((((((...(((((((((.((&)).))))))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346880
GeneSymbolMFSD2B
Binding site1852,1876
Score1.0
Seed0
Au0.441
Energy-22.7
Binding len24
Me-8.851
Phylopstem-0.35558488888888884
Phylopflank0.10199367500000003
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure