Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCCCAGATGAAGTTTGTGTTTTGTGGGGGGGGCCTTGTGT
(((.((((((((((((((((((&))).)))))))...................))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052989
GeneSymbolIFT122
Binding site3925,3969
Score0.846
Seed0
Au0.529
Energy-25.8
Binding len44
Me-6.97
Phylopstem0.6474172868421055
Phylopflank0.51617442375
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure