Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGATGACCCTGGCCCATGACCAGCATCCTGGGGACGGCCTGCACCCTCTGCCCGCCTTGGGGTCTG
(((((((((((((((((((..&.)))))).))).))))................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_052989
GeneSymbolIFT122
Binding site3814,3880
Score0.846
Seed1
Au0.397
Energy-26.1
Binding len39
Me-3.938
Phylopstem0.9509841918918924
Phylopflank2.2804200037499998
Longest consecutive pairings6
Position of longest consecutive pairings32
Pairings in 3prime end6
PositionCDS
2D Structure