Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAACCTCTTGCAGGAGGGAGCACACGAGTGA
((((((((((((((((.(.(((&.)))).))))))))))).))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052995
GeneSymbolCLRN1
Binding site310,342
Score0.846
Seed1
Au0.412
Energy-23.1
Binding len27
Me-3.938
Phylopstem-0.30503325000000003
Phylopflank0.015020378750000021
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure