Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGCACCGGCTGCTGGTGG
(((((((.((...((((((...&))))))....))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_053006
GeneSymbolTSSK2
Binding site1046,1068
Score0.846
Seed1
Au0.397
Energy-21.1
Binding len22
Me-13.712
Phylopstem0.7379446
Phylopflank0.9035933150000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure