Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCCAAGATGCCAGA
..(((((((.....((((((..&))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_053052
GeneSymbolSNAP47
Binding site958,976
Score0.936
Seed1
Au0.559
Energy-17.3
Binding len18
Me-14.517
Phylopstem3.208032285714286
Phylopflank3.2166088575000007
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure