Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTACCAACAGCATAGGTTTTCATCACTGGAAGGAGCCTGTGT
(((.(((((((((((((..(((&)))..))).....................)))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_053055
GeneSymbolTHEM4
Binding site1628,1672
Score0.846
Seed0
Au0.529
Energy-24.6
Binding len44
Me-6.97
Phylopstem0.13204763823529406
Phylopflank0.21292034074999996
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure