Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGGCAGAGTACTACTGCGCCAAATTTGGTGCCTGGAGTAGGAGCTAGTA
.(((((((((((((((((((..&.))))))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_053067
GeneSymbolUBQLN1
Binding site1338,1390
Score1.0
Seed1
Au0.5
Energy-28.4
Binding len22
Me-3.793
Phylopstem1.54076805
Phylopflank2.2376948687500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure