Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCTTTCATGGAGTCAT
...(((((((.....(((((((&)))))))......))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_053282
GeneSymbolSH2D1B
Binding site1971,1992
Score0.923
Seed0
Au0.647
Energy-19.6
Binding len21
Me-15.568
Phylopstem-0.14827874285714282
Phylopflank0.21689322499999997
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure