Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCTTGGCCAGGG
.((((((...(((.((((....&)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047421291
GeneSymbolPTP4A3
Binding site2471,2486
Score0.846
Seed1
Au0.368
Energy-17.0
Binding len15
Me-9.263
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure