Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAACGAGCCGGG
..(((((((..((((((((...&)))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_054025
GeneSymbolB3GAT1
Binding site216,233
Score0.923
Seed1
Au0.132
Energy-26.0
Binding len17
Me-9.024
Phylopstem0.5809170375
Phylopflank0.7971631650000002
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure