Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCTGGAAAAAGATTGAACCGAAGGGGAAGGGGCCATGTC
.(((((((((((((((((((((&)))))))....................)))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_057161
GeneSymbolKLHDC3
Binding site984,1027
Score0.846
Seed1
Au0.412
Energy-23.7
Binding len43
Me-3.793
Phylopstem4.461888066928569
Phylopflank5.1633973625
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure