Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGAACGCTCAAACGAAACAACTGCAAACAGCTGTC
..((((((((((((((...((&.))...)))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047421350
GeneSymbolCIBAR1
Binding site120,158
Score0.846
Seed1
Au0.559
Energy-18.6
Binding len25
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure