Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCGTTTGTGGCCAGGA
.((((((.(((((....(((..&)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_057166
GeneSymbolCOL6A3
Binding site5893,5910
Score0.923
Seed1
Au0.485
Energy-16.8
Binding len17
Me-7.932
Phylopstem2.905134783333333
Phylopflank1.8876951425
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure