Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGAGGGGGGTCAAAGTGT
(((((((((((((((((((.((&))))))))))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_057166
GeneSymbolCOL6A3
Binding site3717,3741
Score1.0
Seed1
Au0.441
Energy-29.3
Binding len24
Me-3.938
Phylopstem0.8057667619047622
Phylopflank2.45167875875
Longest consecutive pairings18
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure