Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCGTTTGTGGCCAGGA
.((((((.(((((....(((..&)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_057167
GeneSymbolCOL6A3
Binding site7096,7113
Score0.846
Seed1
Au0.485
Energy-16.8
Binding len17
Me-7.932
Phylopstem2.244535
Phylopflank2.693663165
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure