Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGGAAGGTCCCGGTT
.(((((..((((((((((((((&))))))))))))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_057176
GeneSymbolBSND
Binding site3846,3868
Score0.962
Seed0
Au0.441
Energy-32.2
Binding len22
Me-7.651
Phylopstem-0.04901863571428571
Phylopflank-0.661245995
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure