Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTTAGCGGGGCCAGTGA
((((((((((...((((((...&)))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_058167
GeneSymbolUBE2J2
Binding site1448,1466
Score0.846
Seed1
Au0.338
Energy-25.2
Binding len18
Me-11.398
Phylopstem2.7780065000000005
Phylopflank3.172630045
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure