Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCTGGACAGGTGGCCT
....(((((((.(((((((((.&))))))))).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_058176
GeneSymbolHDAC9
Binding site2655,2674
Score0.846
Seed0
Au0.529
Energy-21.1
Binding len19
Me-12.893
Phylopstem5.219996666666668
Phylopflank5.075203856250001
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure