Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGGGAGGGCTTCCTGGACACGCTGGTGGTGCTGCACCGGGCCGGG
..(((((((((((((((((((.&)))))))))))))..............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_058197
GeneSymbolCDKN2A
Binding site557,607
Score0.846
Seed1
Au0.235
Energy-28.8
Binding len50
Me-4.957
Phylopstem1.6506443306122454
Phylopflank0.36847502000000015
Longest consecutive pairings13
Position of longest consecutive pairings37
Pairings in 3prime end7
Position3UTR
2D Structure