Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCATGTAGCAGTGACCCAGGCTTGGGAGCCAGA
..(((((((((.(((((((...&.)))))))...))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_058246
GeneSymbolDNAJB6
Binding site2277,2311
Score0.846
Seed1
Au0.515
Energy-29.2
Binding len21
Me-8.304
Phylopstem-0.588310811111111
Phylopflank-0.10540876874999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure