Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTCTAGGAGGGAGACACTGGCCCCTCAAATCGTCCAGCGA
(.((((((((((((((((.(((&))).))))))))))))....................)))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078467
GeneSymbolCDKN1A
Binding site1663,1706
Score0.846
Seed1
Au0.382
Energy-21.6
Binding len43
Me-5.101
Phylopstem0.2934999916666667
Phylopflank0.012530348750000059
Longest consecutive pairings12
Position of longest consecutive pairings27
Pairings in 3prime end7
Position3UTR
2D Structure