Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGTGGAGCCT
....((((((..(((((((...&))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078469
GeneSymbolBCCIP
Binding site1717,1732
Score0.846
Seed0
Au0.382
Energy-24.1
Binding len15
Me-15.718
Phylopstem-0.7359387142857143
Phylopflank-0.3504346249999999
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure