Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGGCCAGAGAAAGAGCCATGTGA
(((((((((.(((((((.(.((&)).).)))))))..)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078469
GeneSymbolBCCIP
Binding site1907,1932
Score0.923
Seed1
Au0.515
Energy-22.8
Binding len25
Me-5.18
Phylopstem-0.18141210000000002
Phylopflank-0.5864827624999999
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure