Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTGCACTCACAGGAGCCAATGG
((.((((((((....(((((((&))))))).........)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078476
GeneSymbolBTN2A1
Binding site1942,1970
Score0.846
Seed0
Au0.382
Energy-24.3
Binding len28
Me-11.723
Phylopstem0.7467519624999999
Phylopflank0.16764525375
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure