Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTCAGTATTCAAGTTCAGTGGGGACACCAGTGG
((((((.(((((.(((((((((&))))))..............))).)))))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078476
GeneSymbolBTN2A1
Binding site2781,2819
Score0.846
Seed0
Au0.574
Energy-23.3
Binding len38
Me-6.77
Phylopstem-0.24805687826086945
Phylopflank0.04853544750000005
Longest consecutive pairings6
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure