Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGGAAGGGTGGGCTGTGCTGAAGCCAGA
..(((((((((((((((((...&)))))))))))..............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078483
GeneSymbolSLC36A1
Binding site56,88
Score0.846
Seed1
Au0.324
Energy-25.8
Binding len32
Me-4.957
Phylopstem0.11316548064516127
Phylopflank0.38736721875000013
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end5
Position5UTR
2D Structure