Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTTCAGAAGACCCAGGAAGGGCAGCTCCAGCCAGA
..(((((((((((((((((...&.)))))))))))........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078483
GeneSymbolSLC36A1
Binding site4109,4146
Score0.923
Seed1
Au0.397
Energy-27.5
Binding len27
Me-4.957
Phylopstem0.14976617599999995
Phylopflank-0.21993679750000006
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure