Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTAGAGGGGAACCAGG
..((((.((((((((((((...&)))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_078485
GeneSymbolCOL9A1
Binding site87,105
Score0.872
Seed0
Au0.353
Energy-26.3
Binding len18
Me-6.501
Phylopstem-0.14143176666666665
Phylopflank-0.11557806249999998
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure