Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGATGATCCCTCCTACAATGGAGCCATCATAGTGT
((((((((((..(((((((...&)))))))................))))))).....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080282
GeneSymbolABCA10
Binding site3490,3529
Score0.846
Seed1
Au0.544
Energy-20.2
Binding len39
Me-10.109
Phylopstem1.9147619999999999
Phylopflank0.9031786449999997
Longest consecutive pairings7
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure