Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGGACTGTGCTGTGCCAGGA
.(((((((((((..((......&.))..)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080413
GeneSymbolVPS16
Binding site563,587
Score0.846
Seed1
Au0.397
Energy-18.4
Binding len18
Me-5.939
Phylopstem4.71665225
Phylopflank3.56513321
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure