Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGAAGTGAGGAGTCCAT
...((((((((((((((((...&)))))))......)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080413
GeneSymbolVPS16
Binding site2103,2127
Score1.0
Seed0
Au0.412
Energy-22.9
Binding len24
Me-6.515
Phylopstem1.9471458913043471
Phylopflank2.97028970875
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end5
PositionCDS
2D Structure