Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTTCCAATTTGATTCAAAAATATTTTTAACATTGTGAGCCAGC
..(((((.((((((((......&.)))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080473
GeneSymbolGATA5
Binding site2390,2437
Score1.0
Seed0
Au0.603
Energy-19.0
Binding len16
Me-7.271
Phylopstem1.78827075
Phylopflank1.65166966
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end2
Position3UTR
2D Structure