Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGACTGGGTCTGCTGGAGTCTCCACACAGTGG
(((((((((((((((((((...&)))))))))...........))))).......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080473
GeneSymbolGATA5
Binding site1387,1425
Score1.0
Seed1
Au0.382
Energy-22.9
Binding len38
Me-3.938
Phylopstem1.288694651351351
Phylopflank2.30755702875
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure