Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCACACCAAGGAGCCCCCTCCCAGACAGGAAGGAGAAGAGGCAGGTGA
((((.((((((.((((((.((.&.)))))))).))))..........)).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080476
GeneSymbolPIGU
Binding site1534,1585
Score0.846
Seed0
Au0.441
Energy-21.5
Binding len32
Me-11.403
Phylopstem4.141054166666667
Phylopflank3.8233630375000005
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end6
Position3UTR
2D Structure