Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATATTGCATAGCCTTGTCCTCCTGTGTGCCT
....((((((((((((((((..&))))))))....................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080538
GeneSymbolCOLQ
Binding site2637,2674
Score0.846
Seed0
Au0.574
Energy-18.1
Binding len37
Me-9.547
Phylopstem1.5537736752777782
Phylopflank1.524485635
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end6
Position3UTR
2D Structure