Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CAGAAAGGGGATAGTGG
(((((.((((((((((......&)))))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080539
GeneSymbolCOLQ
Binding site699,716
Score0.846
Seed0
Au0.412
Energy-21.8
Binding len17
Me-5.839
Phylopstem-0.39877899999999994
Phylopflank-0.28434491249999994
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure