Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCGTCACCTGTGAGACGGGGTGGCCAGAGGGGACTGCCAGTGC
(((((((((((((((((.((..&.)).))))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080549
GeneSymbolPTPN6
Binding site1859,1904
Score0.923
Seed1
Au0.309
Energy-29.7
Binding len24
Me-3.938
Phylopstem2.263427736842105
Phylopflank1.6385611962499995
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure