Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTACAGCGTCCAGCCAT
...((((..((..(((((((((&)))))))))..))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080552
GeneSymbolSLC32A1
Binding site2215,2236
Score0.923
Seed0
Au0.441
Energy-15.7
Binding len21
Me-14.52
Phylopstem1.6310523333333335
Phylopflank1.4061659750000002
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure