Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGAAGGTGGGTCTGGGGAAAGTGGGCCGAGTGA
(((((((((((((((((((...&))))))))))).................)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080588
GeneSymbolPTPN7
Binding site1712,1750
Score0.923
Seed1
Au0.353
Energy-23.5
Binding len38
Me-3.938
Phylopstem3.164355105405406
Phylopflank4.420697422499998
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end5
Position3UTR
2D Structure