Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCCGGA
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080591
GeneSymbolPTGS1
Binding site1688,1698
Score0.846
Seed1
Au0.397
Energy-16.0
Binding len10
Me-11.418
Phylopstem1.6898281544444445
Phylopflank2.222510802375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure