Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAGGAGAGGCT
....(.((((((((((((....&))))))))).))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_080598
GeneSymbolDDX39B
Binding site1020,1036
Score0.923
Seed0
Au0.485
Energy-20.3
Binding len16
Me-11.448
Phylopstem5.65453076923077
Phylopflank5.103011055
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure