Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGGTGCCGGA
..(((((((...((((((....&)))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_080600
GeneSymbolMAG
Binding site596,611
Score0.846
Seed1
Au0.324
Energy-17.3
Binding len15
Me-12.371
Phylopstem2.4126591428571422
Phylopflank3.30381961
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure